Team Converge at ProbSum 2023: Abstractive Text Summarization of Patient Progress Notes
Gaurav Kolhatkar, Aditya Paranjape, Omkar Gokhale, Dipali Kadam
BioNLP and BioNLP-ST 2023 Short Paper
TLDR:
In this paper, we elaborate on our approach for the shared task 1A issued by BioNLP Workshop 2023 titled Problem List Summarization. With an increase in the digitization of health records, a need arises for quick and precise summarization of large amounts of records. With the help of summarization,
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Abstract:
In this paper, we elaborate on our approach for the shared task 1A issued by BioNLP Workshop 2023 titled Problem List Summarization. With an increase in the digitization of health records, a need arises for quick and precise summarization of large amounts of records. With the help of summarization, medical professionals can sieve through multiple records in a short span of time without overlooking any crucial point. We use abstractive text summarization for this task and experiment with multiple state-of-the-art models like Pegasus, BART, and T5, along with various pre-processing and data augmentation techniques to generate summaries from patients' progress notes. For this task, the metric used was the ROUGE-L score. From our experiments, we conclude that Pegasus is the best-performing model on the dataset, achieving a ROUGE-L F1 score of 0.2744 on the test dataset (3rd rank on the leaderboard).